Google

蓝海人类学在线 Ryan WEI's Forum of Anthropology

 找回密码
 注册
查看: 3562|回复: 5

潮汕汉族的疑似M117+ Y-STR分型

[复制链接]
发表于 2017-8-19 21:18 | 显示全部楼层 |阅读模式
本帖最后由 Yungsiyebu 于 2017-8-20 00:25 编辑

数据来自:Haplotype data for 27 Y-chromosomal STR loci in the Chaoshan Han population, South China

yfiler 17 y-str,Eulidean距离<=1.4142136,即2步突变距离。筛选1000G和个人中高通量测试样本的匹配样本。

疑似Y7080+ 4例。
H114HanGuangdong chaoshan1F5 CTS1642 Y7080
H116HanGuangdong chaoshan1F5 CTS1642 Y7080
H117HanGuangdong chaoshan1F5 CTS1642 Y7080
H122HanGuangdong chaoshan1F5 CTS1642 Y7080
19385a385b389AB389CD390391392
1413171216251014
1413171216251014
1413171216251014
1413161216261014
393437438439448456458635H4
121411132015182013
121511132015182013
121511132015202012
121511132015182012

疑似CTS5063+,6例;
No.Populationlocation,freSNPHalpogroupSNP excepted
H63HanGuangdong chaoshan1F5 CTS5063 *
H64HanGuangdong chaoshan1F5 CTS5063 *
H65HanGuangdong chaoshan1F5 CTS5063 *
H70HanGuangdong chaoshan1F5 CTS5063 *
H71HanGuangdong chaoshan1F5 CTS5063 *
H100HanGuangdong chaoshan1F5 CTS5063 *
19385a385b389AB389CD390391392393
141518121623101412
141518121623101412
141518121623101412
141519121623101412
141519121623101412
141518121624101412
437438439448456458635H4
1511122015192012
1511122015192012
1511122016192012
1511122015192012
1511122015192012
1511122015192011

疑似[size=13.3333px]CTS5063+ [size=13.3333px]CTS1154+,4例;
No.Populationlocation,freSNPHalpogroupSNP excepted
H62HanGuangdong chaoshan1F5 CTS5063 CTS1154
H68HanGuangdong chaoshan1F5 CTS5063 CTS1154
H69HanGuangdong chaoshan1F5 CTS5063 CTS1154
H80HanGuangdong chaoshan1F5 CTS5063 CTS1154
19385a385b389AB389CD390391392393
141518121623101412
141519121623101412
141519121623101412
141519121623101412
437438439448456458635H4
1511122015182112
1511122015182012
1511122015182012
1511132016182012

疑似F438+ F1754+,1例;
No.Populationlocation,freSNPHalpogroupSNP excepted
H42HanGuangdong chaoshan1F5 F438 F1754
19385a385b389AB389CD390391392393
141319121523111412
437438439448456458635H4
1511122015182011


疑似F666+,1例;
No.Populationlocation,freSNPHalpogroupSNP excepted
H107HanGuangdong chaoshan1F5 Y8389 F666 F1531
19385a385b389AB389CD390391392393
141717121624101412
437438439448456458635
16111220151821


疑似[size=13.3333px]F5* [size=13.3333px]NA18624,3例;
No.Populationlocation,freSNPHalpogroupSNP excepted
H101HanGuangdong chaoshan1F5* NA18624
H105HanGuangdong chaoshan1F5* NA18624
H109HanGuangdong chaoshan1F5* NA18624
19385a385b389AB389CD390391392393
141217121624101412
141419121624101412
141317121624101512
437438439448456458635H4
1511132015192012
1511132015192012
1511132015192012
 楼主| 发表于 2017-8-19 21:30 | 显示全部楼层
疑似F317+,32例;
H59HanGuangdong chaoshan1F5+ CTS7634/F3599+ F317/F2188+
H98HanGuangdong chaoshan1F5+ CTS7634/F3599+ F317/F2188+
H99HanGuangdong chaoshan1F5+ CTS7634/F3599+ F317/F2188+
H209HanGuangdong chaoshan1F5+ CTS7634/F3599+ F317/F2188+
H232HanGuangdong chaoshan1F5+ CTS7634/F3599+ F317/F2188+
H235HanGuangdong chaoshan1F5+ CTS7634/F3599+ F317/F2188+
H277HanGuangdong chaoshan1F5+ CTS7634/F3599+ F317/F2188+
H280HanGuangdong chaoshan1F5+ CTS7634/F3599+ F317/F2188+
H282HanGuangdong chaoshan1F5+ CTS7634/F3599+ F317/F2188+
H283HanGuangdong chaoshan1F5+ CTS7634/F3599+ F317/F2188+
H284HanGuangdong chaoshan1F5+ CTS7634/F3599+ F317/F2188+
H285HanGuangdong chaoshan1F5+ CTS7634/F3599+ F317/F2188+
H286HanGuangdong chaoshan1F5+ CTS7634/F3599+ F317/F2188+
H287HanGuangdong chaoshan1F5+ CTS7634/F3599+ F317/F2188+
H288HanGuangdong chaoshan1F5+ CTS7634/F3599+ F317/F2188+
H289HanGuangdong chaoshan1F5+ CTS7634/F3599+ F317/F2188+
H290HanGuangdong chaoshan1F5+ CTS7634/F3599+ F317/F2188+
H291HanGuangdong chaoshan1F5+ CTS7634/F3599+ F317/F2188+
H292HanGuangdong chaoshan1F5+ CTS7634/F3599+ F317/F2188+
H293HanGuangdong chaoshan1F5+ CTS7634/F3599+ F317/F2188+
H294HanGuangdong chaoshan1F5+ CTS7634/F3599+ F317/F2188+
H295HanGuangdong chaoshan1F5+ CTS7634/F3599+ F317/F2188+
H296HanGuangdong chaoshan1F5+ CTS7634/F3599+ F317/F2188+
H297HanGuangdong chaoshan1F5+ CTS7634/F3599+ F317/F2188+
H298HanGuangdong chaoshan1F5+ CTS7634/F3599+ F317/F2188+
H300HanGuangdong chaoshan1F5+ CTS7634/F3599+ F317/F2188+
H302HanGuangdong chaoshan1F5+ CTS7634/F3599+ F317/F2188+
H308HanGuangdong chaoshan1F5+ CTS7634/F3599+ F317/F2188+
H313HanGuangdong chaoshan1F5+ CTS7634/F3599+ F317/F2188+
H329HanGuangdong chaoshan1F5+ CTS7634/F3599+ F317/F2188+
H330HanGuangdong chaoshan1F5+ CTS7634/F3599+ F317/F2188+
H584HanGuangdong chaoshan1F5+ CTS7634/F3599+ F317/F2188+
19385a385b389AB389CD390391392393
141418121623101412
141418121624101412
141518121624101412
151418121525101412
151518121623101412
151418121623101412
151419121624101412
151318121624101412
151417121624101412
151417121624101412
151418121624101412
151418121624101412
151418121624101412
151418121624101412
151418121624101412
151418121624101412
151418121624101412
151418121624101412
151418121624101412
151418121624101412
151418121624101412
151418121624101412
151418121624101412
151419121624101412
151419121624101412
151518121624101412
151418121624101412
151418121624101512
151417121624111412
151418121625101412
151418121625101412
161418121624101412
437438439448456458635H4
1511122015172012
1511122015182012
1511122015182012
1511122015182012
1511122015182012
1511132015182112
1511112015182012
1511122015182012
1511122015172012
1511122015182012
1511122015172012
1511122015172112
1511122015172112
1511122015172112
1511122015182012
1511122015182012
1511122015182012
1511122015182012
1511122015182012
1511122015182112
1511122015192011
1511122015192012
1511122016182012
1511122015182012
1511122015192012
1511122015182012
1511132015182112
1411122015182012
1511122015182012
1511122015182012
1511122015182112
1511122015172012
 楼主| 发表于 2017-8-19 21:32 | 显示全部楼层
本帖最后由 Yungsiyebu 于 2017-8-19 21:34 编辑

还有3例样本,有混淆。

No.Populationlocation,freSNPHalpogroupSNP excepted
H61HanGuangdong chaoshan1F5+ CTS7634/F3599+ F317/F2188+ or F5 CTS5063 *
H118HanGuangdong chaoshan1F5* NA18624 or F5 CTS1642 Y7080
H233HanGuangdong chaoshan1F5+ CTS7634/F3599+ F317/F2188+ or F5 CTS5063 *
19385a385b389AB389CD390391392393
141518121623101412
141318121625101412
151518121623101412
437438439448456458635H4
1511122015182012
1511132015182012
1511122015192012
发表于 2017-8-20 08:29 | 显示全部楼层
本帖最后由 Tocharian_2 于 2017-8-20 09:18 编辑

这一例与本人17STR差2步。

虽说STR差1,2步,甚至全同都可能是偶然造成,不一定说明晚近共祖。可是,这一例在385这个位点上,和我一样是17/17的罕见值。在一个位点上同为罕见值,其它位点基本上又能对上,偶然雷同的可能性就大大降低了。可能代表了一个晚近的簇。

http://www.ranhaer.com/viewthread.php?tid=7452&page=2#pid221374


类似的样本,我在Wu Weiwei浙江数据中见过3例,一个山东千人左右的数据中见过1例,广州样本中见过1例。比例最高的是一个不到千人的甘肃数据有3例。

去年,我在Yhrd上用包含385在内的6STR检索,发现了这例潮汕匹配。现在看到其完整STR数据,确实基本与我匹配。另外,在附近的梅州客家人500多人数据中,找到20例匹配!现在相关文章还没出来,看不到完整STR信息。如果这些样本的确与我匹配的话,这个疑是簇或许与客家人有关。

http://www.ranhaer.com/viewthread.php?tid=7452&page=5#pid493641

希望某一天这个簇能通过高通测序确认。如果F2781占全国人口的比例只有千分之一的话,这个疑是簇顶多只能到万分之几。恐怕要等到高通全面普及的时候了。
IMG_0615.PNG
发表于 2017-8-20 08:57 | 显示全部楼层
4# Tocharian_2

你表达得不严谨,不是与客家人有关,是与华南内陆人群有关
发表于 2017-9-4 10:18 | 显示全部楼层
H122和我只差兩步,而且是同一位點上差兩步,這四位y7080姓什麼呀
您需要登录后才可以回帖 登录 | 注册

本版积分规则

小黑屋|手机版|Archiver|人类生物学在线 ( 苏ICP备16053048号 )

GMT+8, 2020-11-29 10:17 , Processed in 0.171689 second(s), 19 queries .

Powered by Discuz! X3.4

© 2001-2017 Comsenz Inc.

快速回复 返回顶部 返回列表